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Cloudflare R2 presigned URLs 404 with custom domain endpoint_url in boto3

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Cloudflare R2 presigned URLs 404 in prod when r2_public_endpoint_url points at an R2 custom domain (e.g. files.example.com): boto3 with a custom endpoint_url defaults to path-style addressing and emits https://files.example.com/<bucket>/<key>?X-Amz-..., but the custom domain serves the bucket at root, so the bucket path segment 404s. Both presigned GET and presigned PUT break. The tempting fix — stripping the bucket segment and serving files.example.com/<key> directly — appears to work but is a security hole: R2 custom domains do NOT validate SigV4 query parameters at all. A custom domain attached to an R2 bucket enables public access, so every object is world-readable to anyone who knows the key (curl with no auth header and no presigned query string returns 200). Application-layer authz on the download endpoint becomes decorative because the object key is the only secret, and keys are often distributed in API responses.

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R2 only validates presigned signatures on the S3 API endpoint (https://<account_id>.r2.cloudflarestorage.com) — never on custom domains or r2.dev URLs. Fix: (1) presign against the account S3 API endpoint; boto3 path-style https://<account>.r2.cloudflarestorage.com/<bucket>/<key>?X-Amz-... works there. (2) Disconnect the custom domain from the bucket (wrangler r2 bucket domain remove <bucket> --domain <host>) and confirm the managed r2.dev public URL is disabled, unless you genuinely want the whole bucket public. (3) After lockdown, verify signatures are enforced: a presigned URL with one flipped hex digit in X-Amz-Signature must return 403, and a bare key URL on the old custom domain must no longer return 200. No key rotation needed after disabling public access — a key alone grants nothing once every GET requires a fresh signature. If your server runs inside a compose network with MinIO in dev, keep the split internal/public endpoint pattern for dev only (SigV4 bakes the host into the signature); prod should sign against the R2 S3 endpoint directly.

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